Supplementary Methods
The MGH NextGen Sequencing Core | Core Services
Sequencing by Synthesis | RNA Lexicon
Adapter trimming: Why are adapter sequences trimmed from only the 3' ends of reads - Illumina Knowledge
Biomolecules | Free Full-Text | High-Throughput Identification of Adapters in Single-Read Sequencing Data
What is index hopping? - The Sequencing Center
16S rRNA primer designs and amplification strategies | IDT
How short inserts affect sequencing performance
Overview of the different methods used for adapter addition to antibody... | Download Scientific Diagram
The MGH NextGen Sequencing Core | Core Services
The MGH NextGen Sequencing Core | Core Services
Illumina Sequencing (for Dummies) -An overview on how our samples are sequenced. – kscbioinformatics
mRNA-seq
Sequences for primers with Illumina adapters (Nextera transposase... | Download Scientific Diagram
Handling of targeted amplicon sequencing data focusing on index hopping and demultiplexing using a nested metabarcoding approach in ecology | Scientific Reports
Illumina Dye Sequencing | Encyclopedia MDPI
Illumina adapter portfolio - Illumina Knowledge
Indexed Sequencing Overview Guide (15057455)
Ultrahigh-Throughput Multiplexing and Sequencing of >500-Base-Pair Amplicon Regions on the Illumina HiSeq 2500 Platform | mSystems
phylogenetics - Why do NEBNext indexing primers have sequence between the p5 oligo and index? - Bioinformatics Stack Exchange
Illumina Genome Analyzer sequencing. Adapter-modified, single-stranded... | Download Scientific Diagram
Adapter trimming: Why are adapter sequences trimmed from only the 3' ends of reads - Illumina Knowledge
Tomato Epigenome Database
Trimming adapter sequences - is it necessary?
Indexed Sequencing Overview Guide (15057455)
Reference genome-independent assessment of mutation density using restriction enzyme-phased sequencing | BMC Genomics | Full Text
